Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATGGCAGCTGCT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367873
GeneSymbolSOX6
Binding site1387,1402
Score0.846
Seed1
Au0.485
Energy-23.9
Binding len15
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure