Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTCAAGTTTGAATATACAGAGATTGTAGGGAAGGATGTTCTACACACAGGGTA
..((((((((.(((((((((.&.)).))))))).)).........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001166419
GeneSymbolHDAC8
Binding site1469,1523
Score0.885
Seed1
Au0.544
Energy-22.2
Binding len30
Me-7.782
Phylopstem5.370825
Phylopflank5.5731386162500005
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure