Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGCCAGTGGCCAGGG
.((((((.(((...(((((...&))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166694
GeneSymbolCHRNA3
Binding site273,293
Score0.846
Seed1
Au0.382
Energy-18.4
Binding len20
Me-11.6
Phylopstem1.447304666666667
Phylopflank1.555019765
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure