Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTCGTGGTTGCCAGGTC
((((((((..((..........&.))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001167830
GeneSymbolTMED5
Binding site5420,5440
Score1.0
Seed1
Au0.5
Energy-17.4
Binding len14
Me-9.351
Phylopstem2.6727555875
Phylopflank4.5427235425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure