Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAAGGTAATTGTGGCCAGGC
.((((((.((((((........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001367953
GeneSymbolNXPE1
Binding site3680,3700
Score1.0
Seed1
Au0.515
Energy-17.4
Binding len14
Me-7.075
Phylopstem4.103934333333334
Phylopflank3.4347633550000007
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure