Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAAAAGGAGATGCTGCT
..((((((.(..(((((((((&)))))))))..).)...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367953
GeneSymbolNXPE1
Binding site3332,3355
Score0.846
Seed1
Au0.618
Energy-20.1
Binding len23
Me-12.185
Phylopstem2.6183333333333336
Phylopflank4.21956590375
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure