Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGATTCAGCTGCAGCAGGGCGCCCCCTCCAAACTGCAGCTGGTCTG
((((((((((((..((((((.&))))))....)))))))..........................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001168320
GeneSymbolTSPAN9
Binding site2317,2366
Score0.846
Seed1
Au0.412
Energy-26.2
Binding len49
Me-6.084
Phylopstem-0.5467641657894737
Phylopflank-0.47087045625
Longest consecutive pairings7
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure