Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTCTATGGTGCAAAATGGGAGCCAGGCCATGGGAAGGGGAGGCTGGGGTTTG
((((((..((((((((((.((&.))...)))))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001168410
GeneSymbolRIMS1
Binding site4866,4920
Score0.846
Seed0
Au0.426
Energy-27.4
Binding len23
Me-7.795
Phylopstem1.1407514000000003
Phylopflank1.8639518312499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure