Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATATTGTATGGCCT
....((((((((((((((....&)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001168412
GeneSymbolTSPAN3
Binding site3441,3457
Score0.846
Seed0
Au0.632
Energy-17.7
Binding len16
Me-9.547
Phylopstem-0.3317860733333333
Phylopflank-0.0018661125000000167
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure