Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGTGTGTGCAGGG
.(((((((((((((........&))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001168412
GeneSymbolTSPAN3
Binding site1968,1983
Score0.846
Seed1
Au0.574
Energy-16.2
Binding len15
Me-4.762
Phylopstem-0.14054530071428575
Phylopflank-0.06299912224999997
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure