Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGCAGCTGTG
..((((((((((.(((..(((&.))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331012
GeneSymbolITSN1
Binding site556,599
Score0.846
Seed1
Au0.382
Energy-21.5
Binding len20
Me-6.246
Phylopstem2.1657145000000004
Phylopflank3.5190403805
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure