Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGGTGAGGCAGGGCAGGGACAGTCTCCAGGGTCA
.(((((((((.((((((((..&)))))))).)).....................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001170460
GeneSymbolCDK16
Binding site2784,2824
Score0.846
Seed1
Au0.338
Energy-27.5
Binding len40
Me-6.618
Phylopstem0.5403514633333334
Phylopflank0.8385667412499999
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure