Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACGTTGTTAGCCAGGA
.((((((..(((((((((((((&.)))))).)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001170553
GeneSymbolVSIG1
Binding site1829,1878
Score0.846
Seed1
Au0.529
Energy-21.4
Binding len24
Me-7.163
Phylopstem0.060120314285714294
Phylopflank-0.15645743125000006
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure