Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTGTGAATGGGC
.((((...((((((((((((..&))))))))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001170629
GeneSymbolCHD8
Binding site2336,2355
Score0.846
Seed0
Au0.588
Energy-17.3
Binding len19
Me-9.552
Phylopstem4.115046008333334
Phylopflank3.8110929025000004
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure