Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTATATCTGCAGCTTATATCTGCAGT
((((((((((((.((((((..&)))))).)))))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368065
GeneSymbolLDB3
Binding site4933,4960
Score0.846
Seed1
Au0.632
Energy-20.8
Binding len27
Me-5.227
Phylopstem0.6749780368421053
Phylopflank0.8898443800000001
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure