Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACGCAGCCCGGCTGGGC
.(.((((((.((((((..((.&))..)))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368065
GeneSymbolLDB3
Binding site24,43
Score0.846
Seed0
Au0.338
Energy-21.0
Binding len19
Me-6.593
Phylopstem-0.40832303333333336
Phylopflank0.4633956344444444
Longest consecutive pairings12
Position of longest consecutive pairings3
Pairings in 3prime end5
Position5UTR
2D Structure