Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCATGTGGTCCCCCCCCTTTTTTTTTTTTTTGCATTGTATGTCAA
...((((((((((((((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001170765
GeneSymbolLCOR
Binding site10106,10154
Score0.923
Seed0
Au0.588
Energy-21.1
Binding len18
Me-6.515
Phylopstem2.857296375
Phylopflank4.64450551
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure