Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCGACCACTTCTGAAGGGCTGCTGCAGTATGCTGGGTG
(((((((((((..(((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001170905
GeneSymbolZNF736
Binding site4479,4520
Score1.0
Seed1
Au0.485
Energy-21.3
Binding len18
Me-8.574
Phylopstem-0.10361263636363632
Phylopflank0.08560885000000003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure