Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTCACACAGAAATCGCACCCGT&GCGTCTGAGGGAGCGGAGGTCTTCCTGGGTGCGTTTGTGTCTCTTGTGAA
..(((((((.(((.((((((((.&.))))))))))).))).....)))).
Details
MiRNAhsa-miR-342-3p
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site718,768
Score0.846
Seed1
Au0.441
Energy-22.2
Binding len26
Me-7.056
Phylopstem0.17549565000000003
Phylopflank0.13379368875000006
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure