Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTTTGCACGGGTGGGCCTTGTCT&GGAAATGTCCCTCCCAGAGTGAAGTCGCAGGGCCCGCCCCGCGTCTGAGGGAGCGGAGGTCTTCCTGGGTGCGT
...((((((((((((((((((..&.))))))))))))).............................))))).
Details
MiRNAhsa-miR-557
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site678,752
Score1.0
Seed0
Au0.382
Energy-30.3
Binding len49
Me-6.515
Phylopstem-0.06153559787234043
Phylopflank0.39393715875000007
Longest consecutive pairings13
Position of longest consecutive pairings35
Pairings in 3prime end6
Position5UTR
2D Structure