Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTCTAGGATTGTTGGAGGAG&CTCCTAGTGCATCCTCAAGACCT
.(((((((((.(((...(((((&)))))...)))))))..))))).
Details
MiRNAhsa-miR-601
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site993,1016
Score0.846
Seed1
Au0.529
Energy-20.9
Binding len23
Me-7.587
Phylopstem3.9564407272727276
Phylopflank3.8550069599999994
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure