Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGTAATTGCGGTCTTTGGT&CCAGTGTTCGCAGTTGCA
....((((((((((...((((.&))))...)))))))))).
Details
MiRNAhsa-miR-548j-5p
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site1114,1132
Score0.846
Seed0
Au0.515
Energy-17.6
Binding len18
Me-10.515
Phylopstem2.075595
Phylopflank3.09092006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure