Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGACAGCGCCCTGCCTGGCTC&GAGCGAGAGGGAATTTGGGAGGGCCAGGGGTTAGTCTGGCCTCTGTCTTAGCTGTCAT
(((((((((((((((((((((&.))))))))...)))...)))..........))))))).
Details
MiRNAhsa-miR-2277-3p
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site778,836
Score0.923
Seed1
Au0.544
Energy-26.3
Binding len39
Me-3.938
Phylopstem0.39071666216216233
Phylopflank0.2271275125
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end8
Position5UTR
2D Structure