Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCTGGAACATAGTAGGGACT&TGCCTACTACGGGCGG
((((((.....(((((((.(..&).))))))))))))).
Details
MiRNAhsa-miR-3116
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site281,297
Score0.808
Seed0
Au0.412
Energy-17.0
Binding len16
Me-12.919
Phylopstem0.07969285714285715
Phylopflank0.23649284375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure