Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATAAAATGAGGGCAGTAAGAC&GTCTTCTGGAGACTGTTTCAGAAGATTTCACCTGTCTGCCCTTATTC
.....(((((((((((..((..&.))..))))))))))).
Details
MiRNAhsa-miR-3163
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site1470,1517
Score0.923
Seed0
Au0.544
Energy-20.2
Binding len17
Me-13.666
Phylopstem0.8125905454545456
Phylopflank3.27148403125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure