Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCATCCTCGTCTCCCTCCCAG&TTGGGAGGGCCAGGGGT
....((((....(((((((((&)))))))))...)))).
Details
MiRNAhsa-miR-5196-3p
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site792,809
Score1.0
Seed0
Au0.456
Energy-21.7
Binding len17
Me-18.017
Phylopstem0.24830924444444444
Phylopflank0.3135107975
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end8
Position5UTR
2D Structure