Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGTAATTGCGGGTTTTGCC&GCATCCTCAAGACCTGAAGATTACTTTA
.(((((((((.(((((((((..&.)))))))))..))))))))).
Details
MiRNAhsa-miR-548as-5p
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site1001,1029
Score0.846
Seed1
Au0.559
Energy-19.6
Binding len22
Me-6.618
Phylopstem3.1054391111111115
Phylopflank3.689035635
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure