Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGAAATGCTGGACTAATCTGC&GGGTTAGTCTGGCCTCTGTCTTA
((((...(((((((((((((..&))))))))))))).....)))).
Details
MiRNAhsa-miR-5680
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site805,828
Score0.846
Seed0
Au0.559
Energy-19.9
Binding len23
Me-11.501
Phylopstem0.6536219384615385
Phylopflank0.23010616249999993
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure