Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGATGAAGCGGGGGGGCG&CCCCTCCGCG
.........(((((((((..&))))))))).
Details
MiRNAhsa-miR-6088
RefseqIDNM_001171182
GeneSymbolCENPL
Binding site621,631
Score0.846
Seed0
Au0.338
Energy-20.3
Binding len10
Me-20.48
Phylopstem0.21300644444444447
Phylopflank0.20031910000000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure