Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGCCAGGG
.((((((.((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331018
GeneSymbolVPS26C
Binding site1719,1730
Score0.923
Seed1
Au0.485
Energy-15.9
Binding len11
Me-9.221
Phylopstem-0.44743278333333336
Phylopflank-0.45813353625000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure