Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCA
.((((((((.((((((((...&.)).)))))))))).............................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001171581
GeneSymbolITM2A
Binding site152,207
Score0.846
Seed1
Au0.353
Energy-20.7
Binding len48
Me-5.036
Phylopstem0.39801878888888886
Phylopflank0.7276286587499999
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end5
PositionCDS
2D Structure