Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCTATATTGTAACTGCCAGA
..((((((((((((((((....&.))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001171606
GeneSymbolPREPL
Binding site4118,4140
Score1.0
Seed1
Au0.559
Energy-21.3
Binding len20
Me-4.957
Phylopstem4.098654416666666
Phylopflank3.40808759875
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure