Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTCACGCCCAGAGGGGGCGGGGTGA
((((.((.(((((((((((...&.)))))))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001331018
GeneSymbolVPS26C
Binding site555,583
Score0.923
Seed0
Au0.309
Energy-26.9
Binding len21
Me-10.37
Phylopstem-0.3794289545454545
Phylopflank-0.06607868800000002
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure