Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCCTCTCCTTTTGCAGGGTGCCAGGG
.((((((((....((((((...&.))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001171941
GeneSymbolFNDC5
Binding site787,816
Score0.923
Seed1
Au0.574
Energy-20.2
Binding len18
Me-12.497
Phylopstem0.03770475000000001
Phylopflank0.33246538125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure