Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTACATTTGCCT
....((((...(((((((((((&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001172087
GeneSymbolPEX2
Binding site4088,4104
Score0.846
Seed0
Au0.588
Energy-16.6
Binding len16
Me-14.67
Phylopstem-0.4924485454545454
Phylopflank0.6216738000000002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure