Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGTGTCAA
...((((.((..(((((((((.&)))))))))..)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001331020
GeneSymbolRO60
Binding site4685,4704
Score0.846
Seed0
Au0.441
Energy-21.1
Binding len19
Me-15.0
Phylopstem-0.34161637
Phylopflank-0.09996111787500007
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure