Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATATTGTATGCCTCACAGTTTACAGGATTCTGAAATGTAGTGGGTG
((((((((((((((((......&)))))))))))).............................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001172312
GeneSymbolPLS1
Binding site2241,2287
Score0.846
Seed1
Au0.632
Energy-17.3
Binding len46
Me-3.938
Phylopstem1.9064653111111107
Phylopflank1.9848645899999997
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end2
Position3UTR
2D Structure