Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCATTGTGATGTCAGT
..(((((((((((((.(((...&)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001172411
GeneSymbolVANGL1
Binding site8482,8500
Score0.923
Seed1
Au0.632
Energy-17.4
Binding len18
Me-5.19
Phylopstem0.08625978571428569
Phylopflank0.19260814250000002
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure