Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGAGTATGCCAA
...((((((((..(.((((...&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001172626
GeneSymbolAMPD1
Binding site1940,1955
Score0.846
Seed0
Au0.662
Energy-15.2
Binding len15
Me-11.886
Phylopstem2.1752241000000003
Phylopflank2.647323502500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure