Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCATTTCTGCTGCTGTTCCTGTACCGCCGCTGCAAG
(((((((.(((((....(((.&.)))..))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368163
GeneSymbolSMIM28
Binding site359,399
Score0.981
Seed1
Au0.353
Energy-24.1
Binding len20
Me-8.077
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure