Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAACACTGCACCAGGAACACAGCTGCT
..(((((((..(((.(..(((&.))).).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368165
GeneSymbolCSNKA2IP
Binding site1584,1613
Score0.846
Seed1
Au0.559
Energy-17.3
Binding len19
Me-9.76
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure