Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCTGCAATGCGGCCTGCCTGTGGGGAGGCTGGAGAGGAGGCTGCCAGTACTTTTGAGCCAGGGTCC
.(((((((((((((((((((.&.))))))))))))...........................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001172700
GeneSymbolSHROOM1
Binding site2302,2369
Score0.846
Seed1
Au0.412
Energy-33.8
Binding len48
Me-3.793
Phylopstem-0.225083102173913
Phylopflank0.050035705
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure