Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGCCAGGG
.((((((.((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331021
GeneSymbolVPS26C
Binding site1950,1961
Score0.923
Seed1
Au0.485
Energy-15.9
Binding len11
Me-9.221
Phylopstem-0.06017763333333336
Phylopflank-0.54679493875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure