Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTAAGGCGTGTGTGCTAGT
..(((((((((.((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001173490
GeneSymbolPRRG1
Binding site2788,2809
Score0.846
Seed1
Au0.632
Energy-16.4
Binding len15
Me-8.304
Phylopstem0.46170442666666667
Phylopflank0.28233215700000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure