Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGTCGGCCAGGTT
(((((((..((..(((((....&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001173512
GeneSymbolMRRF
Binding site4841,4858
Score0.846
Seed1
Au0.515
Energy-18.3
Binding len17
Me-11.944
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure