Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGG
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001173531
GeneSymbolPOU5F1
Binding site1382,1392
Score1.0
Seed1
Au0.574
Energy-16.2
Binding len10
Me-13.079
Phylopstem0.4448404444444444
Phylopflank-0.14846018999999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure