Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATTTCCTGGTAGAGACTATAAAATTGGGAAAATTACTTCGGCCAAATCACTTGTGGGGTTA
.((((((((((((((((((..&.)))))).........))).........))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001174044
GeneSymbolSPAM1
Binding site1199,1262
Score0.923
Seed1
Au0.618
Energy-21.2
Binding len38
Me-3.793
Phylopstem1.8386959166666665
Phylopflank2.4345274875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure