Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTTTATATGCCAGT
..((((((((.(((((((....&)))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001174045
GeneSymbolSPAM1
Binding site1004,1023
Score0.846
Seed1
Au0.647
Energy-17.1
Binding len19
Me-7.782
Phylopstem0.8059928749999999
Phylopflank2.6778348625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure