Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCTGCACAGTCCCTTCTCTCATTCTCAGGCTGCAGA
(((((((((((((((.(((((&)))))))))).)))......................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368302
GeneSymbolGTF2IRD2B
Binding site180,224
Score0.923
Seed1
Au0.441
Energy-23.1
Binding len44
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position5UTR
2D Structure