Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGCCAGGG
.((((((.((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331022
GeneSymbolVPS26C
Binding site2013,2024
Score0.923
Seed1
Au0.485
Energy-15.9
Binding len11
Me-9.221
Phylopstem-0.3862864499999999
Phylopflank-0.6843725575000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure